MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Bacteroides acidifaciens
8_33DSS_C5_S8
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
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NCBI Annotation
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Genome Info
Taxon Description
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NCBI Genome Annotation:
contigs: 484
bases: 5,219,070 bps
CDS: 4,488
rRNA: 11
tRNA: 69
tmRNA: 1
Total number of protein coding genes annotated/found:
4,263
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Items 21 - 40
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5047|JADGLP010000001.1
MBF0833569.1
Genome Viewer
NA
AA
330/110
21307-20978
DUF5056 domain-containing protein
SEQF5047|JADGLP010000001.1
MBF0833570.1
Genome Viewer
NA
AA
552/184
21839-21288
RNA polymerase sigma factor
SEQF5047|JADGLP010000001.1
MBF0833571.1
Genome Viewer
NA
AA
675/225
22510-21836
hypothetical protein
SEQF5047|JADGLP010000001.1
MBF0833572.1
Genome Viewer
NA
AA
1464/488
22619-24082
rRNA cytosine-C5-methyltransferase
SEQF5047|JADGLP010000001.1
MBF0833573.1
Genome Viewer
NA
AA
1194/398
25270-24077
TolC family protein
SEQF5047|JADGLP010000001.1
MBF0833574.1
Genome Viewer
NA
AA
3132/1044
28450-25319
efflux RND transporter permease subunit
SEQF5047|JADGLP010000001.1
MBF0833575.1
Genome Viewer
NA
AA
1260/420
29837-28578
efflux RND transporter periplasmic adaptor subunit
SEQF5047|JADGLP010000001.1
MBF0833576.1
Genome Viewer
NA
AA
414/138
30339-29926
hypothetical protein
SEQF5047|JADGLP010000001.1
MBF0833577.1
Genome Viewer
NA
AA
1638/546
32357-30720
ABC-F family ATP-binding cassette domain-containing protein
SEQF5047|JADGLP010000001.1
MBF0833578.1
Genome Viewer
NA
AA
156/52
32457-32612
hypothetical protein
SEQF5047|JADGLP010000001.1
MBF0833579.1
Genome Viewer
NA
AA
2250/750
34989-32740
inorganic phosphate transporter
SEQF5047|JADGLP010000001.1
MBF0833580.1
Genome Viewer
NA
AA
2133/711
37238-35106
RNA degradosome polyphosphate kinase
SEQF5047|JADGLP010000001.1
MBF0833581.1
Genome Viewer
NA
AA
495/165
37294-37788
metallophosphoesterase family protein
SEQF5047|JADGLP010000001.1
MBF0833582.1
Genome Viewer
NA
AA
870/290
37916-38785
glucose-1-phosphate thymidylyltransferase RfbA
SEQF5047|JADGLP010000001.1
MBF0833583.1
Genome Viewer
NA
AA
1137/379
38807-39943
dTDP-glucose 4%2C6-dehydratase
SEQF5047|JADGLP010000001.1
MBF0833584.1
Genome Viewer
NA
AA
891/297
40880-39990
1%2C4-dihydroxy-2-naphthoate polyprenyltransferase
SEQF5047|JADGLP010000001.1
MBF0833585.1
Genome Viewer
NA
AA
711/237
41733-41023
hypothetical protein
SEQF5047|JADGLP010000001.1
MBF0833586.1
Genome Viewer
NA
AA
735/245
42490-41756
hypothetical protein
SEQF5047|JADGLP010000001.1
MBF0833587.1
Genome Viewer
NA
AA
945/315
43453-44397
Rpn family recombination-promoting nuclease/putative transposase
SEQF5047|JADGLP010000001.1
MBF0833588.1
Genome Viewer
NA
AA
1065/355
44453-45517
metallophosphoesterase
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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